Cardinal Stefan Wyszynski University in Warsaw - Central Authentication System

Basics of Philogenesis

General data

Course ID:	WB-BI-EOP-10cw
Erasmus code / ISCED:	13.1 Kod klasyfikacyjny przedmiotu składa się z trzech do pięciu cyfr, przy czym trzy pierwsze oznaczają klasyfikację dziedziny wg. Listy kodów dziedzin obowiązującej w programie Socrates/Erasmus, czwarta (dotąd na ogół 0) – ewentualne uszczegółowienie informacji o dyscyplinie, piąta – stopień zaawansowania przedmiotu ustalony na podstawie roku studiów, dla którego przedmiot jest przeznaczony. / (unknown)
Course title:	Basics of Philogenesis
Name in Polish:	Podstawy filogenezy
Organizational unit:	Faculty of Biology and Environmental Sciences
Course groups:
ECTS credit allocation (and other scores):	0 OR 2.00 (depends on study program) Basic information on ECTS credits allocation principles: the annual hourly workload of the student’s work required to achieve the expected learning outcomes for a given stage is 1500-1800h, corresponding to 60 ECTS; the student’s weekly hourly workload is 45 h; 1 ECTS point corresponds to 25-30 hours of student work needed to achieve the assumed learning outcomes; weekly student workload necessary to achieve the assumed learning outcomes allows to obtain 1.5 ECTS; work required to pass the course, which has been assigned 3 ECTS, constitutes 10% of the semester student load. view allocation of credits
Language:	Polish
(in Polish) Dyscyplina naukowa, do której odnoszą się efekty uczenia się:	biological sciences
Subject level:	elementary
Learning outcome code/codes:	BI1_W01 BI1_W04 BI1_W05 BI1_W08 BI1_U01 BI1_U02 BI1_U07 BI1_U11 BI1_K07
Short description:	The student will be familiarized with the basic knowledge of systematics, phylogeny and animal classification. The proposed subject includes the comparison of classical and molecular methods of phylogeny reconstruction.
Full description:	How to use GenBank databases and how search for sequences data in the programme Blast. GeneDoc - how edit sequences. Clustal X - sequence alignment. Methods for building phylogenetic trees . MEGA program -how to study the genetic mechanisms of evolutionary processes. Phylogenesis of apes based on the sequence of mitochondrial genes (cytB). Parsymony method in phylogenetics. Construction of phylogenetic tree based on the rRNA gene sequence of small ribosomal subunit (18SRNA). Assessment of the reliability of phylogenetic trees by self-sampling. Models of DNA and protein sequence evolution. Calculation of distances between sequences. Paup phylogenetic analysis program. Maximum likelihood method and choice of DNA sequence evolution model with PartitionFinder. MrBayes program and Bayesian approach to phylogenetic analysis. BEAST - dating of human phylogeny along with reconstruction of evolution of human and primate morphological features.
Bibliography:	Barry G. Hall. Łatwe drzewa filogenetyczne
Efekty kształcenia i opis ECTS:	BI1_U01, BI1_U02, BI1_U09, BI1_K01, BI1_K03 Participation in exercises and passing the test is the basis for receiving ETCS points
Assessment methods and assessment criteria:	Assessment credit - verification of learning outcomes through the worksheets checking acquired skills, part of the worksheets are open questions. The final grade depends on the points from the worksheets; to get 3 (sufficient) - min. 60% is required, for 4 (good) - min. 75%, out of 5 (very good) - min. 90%. Class attendance - two absences are admitted per semester, in special cases (hospital, special random accidents) three absences can be accepted. Three absences - lowering the grade by 0.5, more absences - incomplete, failed classes. Activity and preparation for each class (possibility of raising the grade by 0.5). Part of the learning is a remote form.

Classes in period "Summer semester 2021/22" (past)

Time span:	2022-02-01 - 2022-06-30	Selected timetable range: weekly course term Navigate to timetable MO TU CW CW W TH FR
Type of class:	Classes, 30 hours more information
Coordinators:	Monika Fajfer-Jakubek
Group instructors:	Monika Fajfer-Jakubek
Course homepage:	https://teams.microsoft.com/l/team/19%3a465aa43d36c04b078ee047d6f794473c%40thread.tacv2/conversations?groupId=690398d0-00b2-4723-b5c5-32e2ea89fbde&tenantId=12578430-c51b-4816-8163-c7281035b9b3
Students list:	(inaccessible to you)
Examination:	graded credit
(in Polish) E-Learning:	(in Polish) E-Learning
Type of subject:	optional with unlimited choices
(in Polish) Grupa przedmiotów ogólnouczenianych:	(in Polish) nie dotyczy
Short description:	(in Polish) Student opanuje podstawową wiedzę z zakresu systematyki, filogenezy i klasyfikacji zwierząt. Proponowany przedmiot dotyczy porównania klasycznych oraz molekularnych metod rekonstrukcji filogenezy.
Wymagania wstępne:	(in Polish) Podstawowa wiedza z zakresu systematyki, zoologii, botaniki.

Classes in period "Summer semester 2022/23" (past)

Time span:	2023-02-01 - 2023-06-30	Selected timetable range: weekly course term Navigate to timetable MO TU CW W TH FR
Type of class:	Classes, 30 hours more information
Coordinators:	Monika Fajfer-Jakubek
Group instructors:	Monika Fajfer-Jakubek
Students list:	(inaccessible to you)
Examination:	graded credit
(in Polish) E-Learning:	(in Polish) E-Learning
Type of subject:	optional with unlimited choices
(in Polish) Grupa przedmiotów ogólnouczenianych:	(in Polish) nie dotyczy
Short description:	(in Polish) Student opanuje podstawową wiedzę z zakresu systematyki, filogenezy i klasyfikacji zwierząt. Proponowany przedmiot dotyczy porównania klasycznych oraz molekularnych metod rekonstrukcji filogenezy.
Wymagania wstępne:	(in Polish) Podstawowa wiedza z zakresu systematyki, zoologii, botaniki.

Course descriptions are protected by copyright.
Copyright by Cardinal Stefan Wyszynski University in Warsaw.